Works on: Windows 10 | Windows 8.1 | Windows 8 | Windows 7 | Windows 2012 SHA1 Hash: c2a04d09f67a1f8bfd644a555963844dcc8e7272 Size: 24.48 MB File Format: zip
Rating: 2
out of 5
based on 23 user ratings
Downloads: 1223 License: Free
PGDSpider is a free software by Heidi Lischer, Laurent Excoffier and works on Windows 10, Windows 8.1, Windows 8, Windows 7, Windows 2012.
You can download PGDSpider which is 24.48 MB in size and belongs to the software category Science CAD. PGDSpider was released on 2011-10-25 and last updated on our database on 2017-03-03 and is currently at version 2.
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PGDSpider Description
PGDSpider was built using the Java programming language as a conversion app for population genetics and genomics programs.
The software facilitates the data exchange possibilities between programs for a vast range of data types (e.g. DNA, RNA, NGS, microsatellite, SNP, RFLP, AFLP, multi-allelic data, allele frequency or genetic distances).
Besides the conventional population genetics formats, PGDSpider integrates population genomics data formats commonly used to store and handle next-generation sequencing (NGS) data.
Currently, PGDSpider is not meant to convert very large NGS files as it loads into memory the whole input file, whose size may exceed available RAM.
However, since PGDSpider allows one to convert specific subsets of these NGS files into any other format, one could use this feature to calculate parameters or statistics for specific regions, and thus perform sliding window analysis over large genomic regions.System requirementsJava
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Windows 7 and above
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