Works on: Windows 10 | Windows 8.1 | Windows 8 | Windows 7 | Windows 2012 SHA1 Hash: 347e87180736bcb28526f84e925c73363783c881 Size: 1.22 KB File Format: jnlp
Rating: 1.913043478
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based on 23 user ratings
Downloads: 1200 License: Free
JFreq is a free software by Viral Bioinformatics and works on Windows 10, Windows 8.1, Windows 8, Windows 7, Windows 2012.
You can download JFreq which is 1.22 KB in size and belongs to the software category Science CAD. JFreq was released on 2011-08-12 and last updated on our database on 2017-03-02 and is currently at version 1.
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JFreq Description
JFreq, short for Java Word Frequencies is designed to be a front-end to Schbaths RMES.
RMES finds the expected and actual frequencies of short nucleotide sequences, or words, using a Markov model to control for the effects of base composition and the frequencies of shorter words.
Unusually frequent or infrequent occurrences of certain words may indicate biological relevance. For example, if the word "TAATTT" occurs much less frequently than expected, it might be that it performs some regulatory function, or makes the sequence vulnerable to mutation or has some other biological function.
RMES can also determine whether words occur in overlapping positions unusually often or unusually rarely, and the expected and actual frequencies of user-supplied words.System requirementsJava
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Windows 7 and above
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